C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S19, pseudogene 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180504 Rps19-ps13-001 ENSMUSG00000095150 10090 + 18:40726269-40726709 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000180504
Transcript ID Testis
ENSMUST00000180504 0.630±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AH CIL_0001AH_0002 CGP 18:40258361-41951194

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221975 RPS19-005 protein_coding Homo_sapiens 0 488
ENST00000405355 RP11-346C16.4-001 processed_pseudogene Homo_sapiens 0 348
ENST00000415286 RPS19P1-001 processed_pseudogene Homo_sapiens 0 403
ENST00000457967 RP11-389O22.4-001 processed_pseudogene Homo_sapiens 0 296
ENST00000593863 RPS19-006 protein_coding Homo_sapiens 0 501
ENST00000598399 RPS19-008 nonsense_mediated_decay Homo_sapiens 2.99878e-43 180
ENST00000598742 RPS19-001 protein_coding Homo_sapiens 0 501

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