Transcript ID | Testis |
---|---|
ENSMUST00000182047 | 26.508±17.76 |
Transcript Info |
||||||
Description: | ring finger protein 4 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000182047 | Rnf4-006 | ENSMUSG00000029110 | 10090 | + | 5:34336932-34353424 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_00057G | CIL_00057G_0002 | CGP | 5:34336289-34486456 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0003677 | ISS | DNA binding |
GO:0004842 | ISS | ubiquitin-protein transferase activity |
GO:0005515 | IPI | protein binding |
GO:0005634 | IDA:ISS | nucleus |
GO:0005737 | IDA:ISS | cytoplasm |
GO:0006351 | IEA | transcription, DNA-templated |
GO:0008134 | IPI | transcription factor binding |
GO:0008270 | IEA | zinc ion binding |
GO:0016874 | IEA | ligase activity |
GO:0031491 | ISS | nucleosome binding |
GO:0032184 | ISS | SUMO polymer binding |
GO:0043161 | ISS | proteasome-mediated ubiquitin-dependent protein catabolic process |
GO:0045893 | ISS | positive regulation of transcription, DNA-templated |
GO:0045944 | IDA:ISS | positive regulation of transcription from RNA polymerase II promoter |
GO:0051865 | ISS | protein autoubiquitination |
GO:0070534 | ISS | protein K63-linked ubiquitination |
GO:0070936 | ISS | protein K48-linked ubiquitination |
GO:0070979 | ISS | protein K11-linked ubiquitination |
GO:0085020 | ISS | protein K6-linked ubiquitination |
GO:0090169 | ISS | regulation of spindle assembly |
GO:0090234 | ISS | regulation of kinetochore assembly |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENST00000314289 | RNF4-001 | protein_coding | Homo_sapiens | 0 | 998 |
ENST00000413346 | RP11-423F24.3-001 | processed_pseudogene | Homo_sapiens | 0 | 628 |
ENST00000502316 | RNF4-008 | protein_coding | Homo_sapiens | 0 | 721 |
ENST00000506706 | RNF4-003 | protein_coding | Homo_sapiens | 0 | 878 |
ENST00000507247 | RNF4-020 | protein_coding | Homo_sapiens | 0 | 296 |
ENST00000508235 | RNF4-022 | nonsense_mediated_decay | Homo_sapiens | 0 | 370 |
ENST00000509258 | RNF4-002 | protein_coding | Homo_sapiens | 0 | 296 |
ENST00000509388 | RNF4-007 | processed_transcript | Homo_sapiens | 0 | 477 |
ENST00000511600 | RNF4-005 | protein_coding | Homo_sapiens | 0 | 998 |
ENST00000511843 | RNF4-011 | processed_transcript | Homo_sapiens | 0 | 414 |
ENST00000511859 | RNF4-004 | protein_coding | Homo_sapiens | 0 | 431 |
ENST00000513284 | RNF4-019 | nonsense_mediated_decay | Homo_sapiens | 7e-22 | 108 |
ENST00000513643 | RNF4-018 | processed_transcript | Homo_sapiens | 0 | 289 |
ENST00000541204 | RNF4-201 | protein_coding | Homo_sapiens | 0 | 549 |