C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8957
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182082 Gm8957-001 ENSMUSG00000098083 10090 - 3:14511084-14512095 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyLungTestisENSMUST00000182082
Transcript ID Adipose Brain Kidney Lung Testis
ENSMUST00000182082 0.057±0.00 0.022±0.02 0.123±0.05 0.044±0.00 0.760±0.36

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 832
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 671
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 811
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 832
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 832
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 296
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 564
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 453
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 531
ENST00000447061 GAPDHP25-001 processed_pseudogene Homo_sapiens 0 547
ENST00000449411 GAPDHP74-001 processed_pseudogene Homo_sapiens 0 237
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 789
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 3e-20 104
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 671
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 671
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 582
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 656
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 628
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 488
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 547
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 508
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 508
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 333
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 763

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