C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase type 13A4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182357 Atp13a4-008 ENSMUSG00000038094 10090 - 16:29408668-29440123 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182357
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182357 0.023±0.00 0.008±0.00 0.252±0.11 0.066±0.04 0.145±0.03 0.022±0.00 0.484±0.18 0.028±0.02 1.137±0.18 0.022±0.01 0.134±0.11 0.015±0.00 1.197±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000N5 CIL_0000N5_0002 CGP 16:29231851-29544864
CIL_0000N8 CIL_0000N8_0002 CGP 16:29395853-29654884

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342695 ATP13A4-003 protein_coding Homo_sapiens 0 1399
ENST00000392443 ATP13A4-007 protein_coding Homo_sapiens 0 1399
ENST00000428352 ATP13A4-001 nonsense_mediated_decay Homo_sapiens 0 953
ENST00000437904 ATP13A4-011 nonsense_mediated_decay Homo_sapiens 0 394
ENST00000450950 ATP13A4-004 nonsense_mediated_decay Homo_sapiens 0 1399
ENST00000474776 ATP13A4-005 retained_intron Homo_sapiens 0 231
ENST00000490925 ATP13A4-002 retained_intron Homo_sapiens 0 669

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