C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 26913
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182391 Gm26913-001 ENSMUSG00000098081 10090 - 13:84690210-84690941 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainKidneyOvaryENSMUST00000182391
Transcript ID Adipose Bladder Brain Kidney Ovary
ENSMUST00000182391 0.043±0.00 0.007±0.00 0.127±0.03 0.044±0.00 0.060±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091F CIL_00091F_0002 VISTA 13:84270408-84872167
CIL_00091E CIL_00091E_0002 VISTA 13:84338983-84939970
CIL_0007Q0 CIL_0007Q0_0002 VISTA 13:84451364-85053074

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 651
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 254
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 636
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 651
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 651
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 436
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 228
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 436
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 468
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 595
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 414
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 399
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 449
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 257
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 337
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 359
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 342
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 283
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 248
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 254
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 254
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 254
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 636
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 490
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 527
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 368
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 255
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 468
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 520
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 327
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 429
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 261

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