C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9568
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182514 Gm9568-001 ENSMUSG00000098203 10090 - 15:75854819-75856228 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverPlacentaTestisENSMUST00000182514
Transcript ID Adipose Bladder Brain Breast Kidney Liver Placenta Testis
ENSMUST00000182514 0.059±0.00 0.009±0.00 0.001±0.00 0.033±0.00 0.062±0.00 0.006±0.00 0.005±0.00 0.030±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0002 VISTA 15:75534812-76135772
CIL_0001NJ CIL_0001NJ_0002 CGP 15:75754432-75867404

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1044
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 822
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1024
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1044
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1044
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 824
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 880
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 726
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 699
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 983
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 569
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 750
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 691
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 571
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1007
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 534
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 822
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 822
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 712
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 782
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 835
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 798
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 763
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 473
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 937

Loading