C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8048
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182555 Gm8048-001 ENSMUSG00000098073 10090 + 5:98153181-98154176 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonOvaryPlacentaENSMUST00000182555
Transcript ID Adipose Colon Ovary Placenta
ENSMUST00000182555 0.032±0.00 0.070±0.00 0.074±0.00 0.064±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069U CIL_00069U_0002 CGP 5:97882783-98187448

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 2e-40 171
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 894
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 675
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 885
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 894
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 894
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 691
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 662
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 623
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 658
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 658
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 503
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 586
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 425
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 529
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 830
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 675
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 675
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 641
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 752
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 675
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 606
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 702
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 377
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 403
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 817

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