C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 26937
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182628 Gm26937-001 ENSMUSG00000098143 10090 + 16:74961240-74962247 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverLungPlacentaTestisENSMUST00000182628
Transcript ID Brain Liver Lung Placenta Testis
ENSMUST00000182628 0.082±0.01 0.020±0.01 0.046±0.01 0.013±0.01 0.032±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 878
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 697
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 865
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 878
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 878
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 316
ENST00000403053 RP1-182O16.2-001 processed_pseudogene Homo_sapiens 3e-32 143
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 704
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 640
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 699
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 636
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 597
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 436
ENST00000447061 GAPDHP25-001 processed_pseudogene Homo_sapiens 0 652
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 628
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 412
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 697
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 697
ENST00000506031 GAPDHP56-001 processed_pseudogene Homo_sapiens 0 291
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 652
ENST00000509132 GAPDHP66-001 processed_pseudogene Homo_sapiens 0 446
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 691
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 688
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 569
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 603
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 518
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 518
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 326
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 787

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