C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7866
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183770 Gm7866-001 ENSMUSG00000061390 10090 - 9:72174580-72174958 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000183770
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000183770 0.419±0.00 0.346±0.10 0.163±0.02 2.610±2.57 0.328±0.13 0.748±0.43 0.249±0.00 0.462±0.35 0.180±0.06 0.238±0.06 0.689±0.21 0.485±0.39 0.227±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TG CIL_0007TG_0002 VISTA 9:71674986-72275900
CIL_0008VA CIL_0008VA_0002 VISTA 9:71675967-72276730
CIL_0004OY CIL_0004OY_0002 CGP 9:71842688-72363777

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000035235 UBC-001 protein_coding Danio_rerio 0 285
ENSDART00000123908 UBC-201 protein_coding Danio_rerio 0 274
ENSDART00000099105 ubc-001 protein_coding Danio_rerio 0 263
ENSDART00000097583 ubb-001 protein_coding Danio_rerio 0 263
ENST00000339647 UBC-001 protein_coding Homo_sapiens 0 291
ENST00000408928 AC099535.4-001 processed_pseudogene Homo_sapiens 0 399
ENST00000461723 UBA52P5-001 processed_pseudogene Homo_sapiens 0 195
ENST00000536769 UBC-007 protein_coding Homo_sapiens 0 291
ENST00000541272 UBC-016 protein_coding Homo_sapiens 0 274

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