C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184101 Kcnn2-003 ENSMUSG00000054477 10090 + 18:45559469-45671249 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000184101
Transcript ID Adipose Adrenal Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000184101 0.053±0.00 68.778±4.66 0.094±0.00 0.292±0.11 1.652±1.12 0.195±0.07 1.057±0.45 0.060±0.00 0.097±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UP CIL_0004UP_0002 CGP 18:44828665-45686024
CIL_0004UO CIL_0004UO_0002 CGP 18:45268860-46212607

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264773 KCNN2-201 protein_coding Homo_sapiens 0 2531
ENST00000503706 KCNN2-002 protein_coding Homo_sapiens 0 409
ENST00000505491 KCNN2-004 nonsense_mediated_decay Homo_sapiens 0 403
ENST00000507750 KCNN2-005 processed_transcript Homo_sapiens 0 412
ENST00000512097 KCNN2-001 protein_coding Homo_sapiens 0 2940
ENST00000610748 KCNN2-202 protein_coding Homo_sapiens 0 1426

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