C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RNA polymerase II associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184294 Rpap1-004 ENSMUSG00000034032 10090 - 2:119763966-119787520 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000184294
Transcript ID Placenta
ENSMUST00000184294 1.266±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IS CIL_0005IS_0003 CGP 2:119751320-119787537
CIL_0005F5 CIL_0005F5_0002 CGP 2:119763304-119818104

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304330 RPAP1-001 protein_coding Homo_sapiens 0 1576
ENST00000561603 RPAP1-004 protein_coding Homo_sapiens 0 1576
ENST00000562303 RPAP1-005 nonsense_mediated_decay Homo_sapiens 0 1576
ENST00000563293 RPAP1-011 retained_intron Homo_sapiens 0 254
ENST00000566863 RPAP1-008 protein_coding Homo_sapiens 0 396
ENST00000567866 RPAP1-010 protein_coding Homo_sapiens 0 483
ENST00000568413 RPAP1-015 processed_transcript Homo_sapiens 0 436

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