C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | autophagy related 4B, cysteine peptidase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000185754  |
Atg4b-008 |
ENSMUSG00000026280 |
10090 | + |
1:93786218-93787899  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004U9 | CIL_0004U9_0003 | CGP | 1:93685660-93754864 |
| CIL_0003ST | CIL_0003ST_0002 | CGP | 1:93701935-93790610 |
| CIL_0004UA | CIL_0004UA_0003 | CGP | 1:93751500-93801934 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000344376
|
ATG4B-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 233 |
|
ENST00000402096
|
ATG4B-006 | protein_coding | Homo_sapiens | 2e-27 | 128 |
|
ENST00000404914
|
ATG4B-002 | protein_coding | Homo_sapiens | 0 | 233 |
|
ENST00000405546
|
ATG4B-001 | protein_coding | Homo_sapiens | 1e-32 | 147 |
|
ENST00000428861
|
ATG4B-027 | protein_coding | Homo_sapiens | 0.0000000000006 | 79 |
|
ENST00000460211
|
ATG4B-028 | retained_intron | Homo_sapiens | 9e-28 | 128 |
|
ENST00000475693
|
ATG4B-008 | retained_intron | Homo_sapiens | 0 | 233 |
|
ENST00000482507
|
ATG4B-004 | retained_intron | Homo_sapiens | 3e-27 | 128 |
|
ENST00000494132
|
ATG4B-029 | retained_intron | Homo_sapiens | 9e-28 | 128 |
|
ENST00000494465
|
ATG4B-003 | retained_intron | Homo_sapiens | 2e-27 | 128 |
