C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | autophagy related 4B, cysteine peptidase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000428861  |
ATG4B-027 |
ENSG00000168397 |
9606 | + |
2:241666596-241671366  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004U9 | CIL_0004U9_0002 | CGP | 2:241558721-241637449 |
| CIL_0003ST | CIL_0003ST_0001 | CGP | 2:241584405-241673857 |
| CIL_0004UA | CIL_0004UA_0002 | CGP | 2:241637213-241686991 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005737 | IEA | cytoplasm |
| GO:0006508 | IEA | proteolysis |
| GO:0006914 | IEA | autophagy |
| GO:0008234 | IEA | cysteine-type peptidase activity |
| GO:0015031 | IEA | protein transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000135762
|
Atg4b-002 | retained_intron | Mus_musculus | 0 | 555 |
|
ENSMUST00000027502
|
Atg4b-001 | protein_coding | Mus_musculus | 0 | 555 |
|
ENSMUST00000186124
|
Atg4b-009 | retained_intron | Mus_musculus | 2e-32 | 143 |
|
ENSMUST00000185754
|
Atg4b-008 | retained_intron | Mus_musculus | 0.0000000000006 | 79 |
|
ENSMUST00000186811
|
Atg4b-011 | nonsense_mediated_decay | Mus_musculus | 0.0000000000006 | 79 |
