C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 29668
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187802 RP24-369P14.2-001 ENSMUSG00000099835 10090 - 1:100282329-100282643 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLiverMusclePlacentaTestisENSMUST00000187802
Transcript ID Adipose Bladder Brain Heart Kidney Liver Muscle Placenta Testis
ENSMUST00000187802 0.230±0.00 3.152±0.58 1.853±0.34 0.189±0.00 0.211±0.03 1.667±1.15 0.281±0.08 0.143±0.12 1.660±0.78

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 377
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 377
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 377
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 377
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 377
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 372
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 331
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 320
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 333
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 283
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 303
ENST00000447061 GAPDHP25-001 processed_pseudogene Homo_sapiens 0 326
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 274
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 372
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 315
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 377
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 377
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 377
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 294
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 298
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 294
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 324
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 331
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 315
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 377

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