C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188971 Lrrc28-010 ENSMUSG00000030556 10090 - 7:67531756-67619976 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000188971
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000188971 11.395±1.94 10.924±3.72 10.703±1.14 12.035±2.58 5.498±1.47 6.137±1.50 17.028±2.12 13.651±5.85 9.753±0.99 12.927±4.00 149.138±18.93

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301981 LRRC28-001 protein_coding Homo_sapiens 0 274
ENST00000447360 LRRC28-003 protein_coding Homo_sapiens 0 274
ENST00000558172 LRRC28-010 protein_coding Homo_sapiens 0 270
ENST00000558248 LRRC28-013 retained_intron Homo_sapiens 0 263
ENST00000558471 LRRC28-009 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000558771 LRRC28-016 processed_transcript Homo_sapiens 0 475
ENST00000558890 LRRC28-012 retained_intron Homo_sapiens 0 274
ENST00000559399 LRRC28-017 processed_transcript Homo_sapiens 2e-40 171
ENST00000559433 LRRC28-021 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000559774 LRRC28-014 processed_transcript Homo_sapiens 0 263
ENST00000559819 LRRC28-004 retained_intron Homo_sapiens 0 274
ENST00000561276 LRRC28-006 protein_coding Homo_sapiens 0 274

Loading