C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559433 LRRC28-021 ENSG00000168904 9606 + 15:99251460-99363178 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLungENST00000559433
Transcript ID Kidney Lung
ENST00000559433 3.348±0.00 2.092±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079Q CIL_00079Q_0002 CGP 15:99251362-99716466

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053950 Lrrc28-001 protein_coding Mus_musculus 0 835
ENSMUST00000190115 Lrrc28-006 processed_transcript Mus_musculus 0 608
ENSMUST00000187953 Lrrc28-003 nonsense_mediated_decay Mus_musculus 0 468
ENSMUST00000191035 Lrrc28-005 nonsense_mediated_decay Mus_musculus 0 459
ENSMUST00000191062 Lrrc28-013 processed_transcript Mus_musculus 0 276
ENSMUST00000188971 Lrrc28-010 processed_transcript Mus_musculus 0 274
ENSMUST00000189836 Lrrc28-011 protein_coding Mus_musculus 0 272
ENSMUST00000032775 Lrrc28-002 protein_coding Mus_musculus 0 272
ENSMUST00000190276 Lrrc28-007 protein_coding Mus_musculus 0 272

Loading