C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000301981 LRRC28-001 ENSG00000168904 9606 + 15:99251362-99390729 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000301981
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000301981 0.441±0.00 0.764±0.47 0.916±0.00 1.050±0.07 0.508±0.11 1.340±0.47 1.093±0.00 0.731±0.00 0.987±0.36 0.595±0.00 0.763±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079Q CIL_00079Q_0002 CGP 15:99251362-99716466

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053950 Lrrc28-001 protein_coding Mus_musculus 0 1404
ENSMUST00000190115 Lrrc28-006 processed_transcript Mus_musculus 0 833
ENSMUST00000187953 Lrrc28-003 nonsense_mediated_decay Mus_musculus 0 684
ENSMUST00000032775 Lrrc28-002 protein_coding Mus_musculus 0 575
ENSMUST00000190276 Lrrc28-007 protein_coding Mus_musculus 0 575
ENSMUST00000191035 Lrrc28-005 nonsense_mediated_decay Mus_musculus 0 573
ENSMUST00000189836 Lrrc28-011 protein_coding Mus_musculus 0 348
ENSMUST00000191062 Lrrc28-013 processed_transcript Mus_musculus 0 276
ENSMUST00000188971 Lrrc28-010 processed_transcript Mus_musculus 0 274

Loading