C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: high mobility group nucleosomal binding domain 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190580 Hmgn3-009 ENSMUSG00000066456 10090 - 9:83109968-83111131 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverMuscleOvaryPlacentaTestisENSMUST00000190580
Transcript ID Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000190580 2.133±0.00 0.491±0.17 0.751±0.20 5.600±0.42 1.020±0.00 1.396±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000621 CIL_000621_0003 CGP 9:82866159-83146685
CIL_000626 CIL_000626_0003 CGP 9:83109948-83441127

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000275036 HMGN3-002 protein_coding Homo_sapiens 0 651
ENST00000344726 HMGN3-001 protein_coding Homo_sapiens 0 538
ENST00000620514 HMGN3-201 protein_coding Homo_sapiens 0 534

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