| Transcript ID | Breast |
|---|---|
| ENST00000240159 | 0.923±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ring finger protein 170 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000240159  |
RNF170-004 |
ENSG00000120925 |
9606 | - |
8:42855248-42896655  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005LW | CIL_0005LW_0002 | CGP | 8:42849637-43030539 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005783 | IEA | endoplasmic reticulum |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016021 | IEA | integral component of membrane |
| GO:0016567 | IEA | protein ubiquitination |
| GO:0016874 | IEA | ligase activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000124757
|
Rnf170-002 | nonsense_mediated_decay | Mus_musculus | 0 | 819 |
|
ENSMUST00000014022
|
Rnf170-001 | protein_coding | Mus_musculus | 0 | 569 |
|
ENSMUST00000153528
|
Rnf170-006 | protein_coding | Mus_musculus | 0 | 508 |
|
ENSMUST00000181188
|
RP23-174D7.1-001 | processed_pseudogene | Mus_musculus | 0 | 505 |
|
ENSMUST00000110579
|
Rnf170-003 | nonsense_mediated_decay | Mus_musculus | 0 | 424 |
|
ENSMUST00000124867
|
Rnf170-004 | nonsense_mediated_decay | Mus_musculus | 0 | 353 |
