| Transcript ID | Brain | Breast | Ovary | Placenta |
|---|---|---|---|---|
| ENST00000243896 | 2.045±0.00 | 3.615±0.00 | 5.317±0.00 | 3.736±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | solute carrier family 35 (GDP-fucose transporter), member C2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000243896  |
SLC35C2-002 |
ENSG00000080189 |
9606 | - |
20:46349528-46364401  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007BF | CIL_0007BF_0001 | CGP | 20:46173733-46364458 |
| CIL_0006G4 | CIL_0006G4_0001 | CGP | 20:46345980-46432985 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005793 | IDA | endoplasmic reticulum-Golgi intermediate compartment |
| GO:0005794 | IEA | Golgi apparatus |
| GO:0005801 | IDA | cis-Golgi network |
| GO:0006810 | IEA | transport |
| GO:0016021 | IEA | integral component of membrane |
| GO:0055085 | IEA | transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000109298
|
Slc35c2-014 | protein_coding | Mus_musculus | 0 | 1345 |
|
ENSMUST00000109299
|
Slc35c2-013 | protein_coding | Mus_musculus | 0 | 1345 |
|
ENSMUST00000109300
|
Slc35c2-012 | protein_coding | Mus_musculus | 0 | 1345 |
|
ENSMUST00000017808
|
Slc35c2-008 | protein_coding | Mus_musculus | 0 | 1345 |
|
ENSMUST00000132270
|
Slc35c2-004 | nonsense_mediated_decay | Mus_musculus | 0 | 1096 |
|
ENSMUST00000154608
|
Slc35c2-007 | retained_intron | Mus_musculus | 0 | 861 |
|
ENSMUST00000156134
|
Slc35c2-010 | protein_coding | Mus_musculus | 0 | 702 |
|
ENSMUST00000133961
|
Slc35c2-009 | protein_coding | Mus_musculus | 0 | 702 |
|
ENSMUST00000129210
|
Slc35c2-002 | protein_coding | Mus_musculus | 0 | 599 |
|
ENSMUST00000155289
|
Slc35c2-003 | protein_coding | Mus_musculus | 0 | 510 |
|
ENSMUST00000131409
|
Slc35c2-016 | protein_coding | Mus_musculus | 0 | 420 |
|
ENSMUST00000129336
|
Slc35c2-005 | protein_coding | Mus_musculus | 0 | 414 |
|
ENSMUST00000125550
|
Slc35c2-015 | retained_intron | Mus_musculus | 0 | 302 |
|
ENSMUST00000145301
|
Slc35c2-006 | nonsense_mediated_decay | Mus_musculus | 0 | 283 |
|
ENSMUST00000147247
|
Slc35c2-011 | retained_intron | Mus_musculus | 0 | 217 |
