C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 83
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000293670 KRT83-001 ENSG00000170523 9606 - 12:52314301-52321398 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyPlacentaTestisENST00000293670
Transcript ID Brain Breast Kidney Placenta Testis
ENST00000293670 0.248±0.03 0.204±0.00 0.033±0.00 0.022±0.00 0.301±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000O CGP 12:52285913-52321398
CIL_00033Q CIL_00033Q_000F CGP 12:52314301-52367481

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005615 IDA extracellular space
GO:0005882 IEA intermediate filament
GO:0007568 IDA aging
GO:0008544 TAS epidermis development
GO:0042633 IDA hair cycle
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023718 5430421N21Rik-001 protein_coding Mus_musculus 0 1607
ENSMUST00000061185 Krt81-201 protein_coding Mus_musculus 0 1504
ENSMUST00000088049 Krt86-201 protein_coding Mus_musculus 0 1443
ENSMUST00000081945 Krt83-201 protein_coding Mus_musculus 0 1430
ENSMUST00000159029 5430421N21Rik-002 retained_intron Mus_musculus 0 817
ENSMUST00000023713 Krt82-201 protein_coding Mus_musculus 0 449
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 220
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 2e-23 115
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 0.0000000003 71
ENSDART00000064983 krt1-c5-201 protein_coding Danio_rerio 0.0000002 62
ENSDART00000139066 krt1-c5-001 protein_coding Danio_rerio 0.0000002 62

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