C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC11 homolog C (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299714 SEC11C-007 ENSG00000166562 9606 + 18:59139875-59158832 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299714
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299714 11.814±0.00 29.184±0.00 62.390±0.00 10.942±0.00 14.747±0.00 5.835±0.00 36.324±0.00 26.608±24.83 16.733±0.00 2.308±0.00 1.953±0.00 7.192±0.22 23.687±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006O6 CIL_0006O6_0001 CGP 18:59139477-59230774

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126432 Sec11c-002 nonsense_mediated_decay Mus_musculus 0 942
ENSMUST00000126651 Sec11c-007 processed_transcript Mus_musculus 0 551
ENSMUST00000125552 Sec11c-006 processed_transcript Mus_musculus 0 545
ENSMUST00000025394 Sec11c-001 protein_coding Mus_musculus 0 545
ENSMUST00000139538 Sec11c-003 retained_intron Mus_musculus 0 542

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