C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SEC11 homolog C (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125552 Sec11c-006 ENSMUSG00000024516 10090 + 18:65806575-65817660 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000125552
Transcript ID Ovary
ENSMUST00000125552 20.829±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086L CIL_00086L_0002 VISTA 18:65229356-65832579
CIL_0006O6 CIL_0006O6_0002 CGP 18:65800549-65886579

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299714 SEC11C-007 nonsense_mediated_decay Homo_sapiens 0 545
ENST00000509791 SEC11C-005 protein_coding Homo_sapiens 0 549
ENST00000585864 SEC11C-004 retained_intron Homo_sapiens 0 363
ENST00000587834 SEC11C-001 protein_coding Homo_sapiens 0 907
ENST00000588875 SEC11C-006 protein_coding Homo_sapiens 0 545
ENST00000591406 SEC11C-008 retained_intron Homo_sapiens 0 545

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