C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006O6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166562-ENSG00000134443 CGP 9606 18:59139477-59230774
GeneTranscriptPositionBiotype
ENSG00000134443 (GRP)
gastrin-releasing peptide
ENST00000256857 (GRP-001) 59220168-59230771 protein_coding
ENST00000420468 (GRP-002) 59220266-59230621 protein_coding
ENST00000456142 (GRP-004) 59225492-59230774 protein_coding
ENST00000529320 (GRP-003) 59220172-59230770 protein_coding
ENST00000530323 (GRP-005) 59225667-59230766 protein_coding
ENSG00000166562 (SEC11C)
SEC11 homolog C (S. cerevisiae)
ENST00000299714 (SEC11C-007) 59139875-59158832 nonsense_mediated_decay
ENST00000509791 (SEC11C-005) 59139866-59157311 protein_coding
ENST00000585864 (SEC11C-004) 59139884-59153361 retained_intron
ENST00000587834 (SEC11C-001) 59139477-59158836 protein_coding
ENST00000588875 (SEC11C-006) 59139899-59158832 protein_coding
ENST00000591406 (SEC11C-008) 59155605-59158832 retained_intron
ENST00000592774 (SEC11C-002) 59139893-59148012 processed_transcript
ENST00000593132 (SEC11C-003) 59139888-59147732 processed_transcript
CIL_0006O6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024516-ENSMUSG00000024517 CGP 10090 18:65800549-65886579
GeneTranscriptPositionBiotype
ENSMUSG00000024516 (Sec11c)
SEC11 homolog C (S. cerevisiae)
ENSMUST00000025394 (Sec11c-001) 65800549-65817665 protein_coding
ENSMUST00000125552 (Sec11c-006) 65806575-65817660 processed_transcript
ENSMUST00000126432 (Sec11c-002) 65800550-65817656 nonsense_mediated_decay
ENSMUST00000126651 (Sec11c-007) 65814014-65817660 processed_transcript
ENSMUST00000139538 (Sec11c-003) 65800603-65817657 retained_intron
ENSMUST00000153193 (Sec11c-004) 65800572-65812728 protein_coding
ENSMUST00000155668 (Sec11c-005) 65801302-65812778 processed_transcript
ENSMUSG00000024517 (Grp)
gastrin releasing peptide
ENSMUST00000025395 (Grp-201) 65873494-65886578 protein_coding
ENSMUST00000173530 (Grp-002) 65873484-65880258 protein_coding
ENSMUST00000173985 (Grp-001) 65872820-65886579 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006O6_0001ENSG00000134443ENST00000256857ENST00000420468ENST00000456142ENST00000529320ENST00000530323ENSG00000166562ENST00000299714ENST00000509791ENST00000585864ENST00000587834ENST00000588875ENST00000591406ENST00000592774ENST00000593132CIL_0006O6_0002ENSMUSG00000024516ENSMUST00000025394ENSMUST00000125552ENSMUST00000126432ENSMUST00000126651ENSMUST00000139538ENSMUST00000153193ENSMUST00000155668ENSMUSG00000024517ENSMUST00000025395ENSMUST00000173530ENSMUST00000173985
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006O6_0001ENSG00000134443ENST00000256857ENST00000420468ENST00000456142ENST00000529320ENST00000530323ENSG00000166562ENST00000299714ENST00000509791ENST00000585864ENST00000587834ENST00000588875ENST00000591406ENST00000593132CIL_0006O6_0002ENSMUSG00000024516ENSMUST00000025394ENSMUST00000125552ENSMUST00000126432ENSMUST00000126651ENSMUST00000139538ENSMUSG00000024517ENSMUST00000025395ENSMUST00000173530ENSMUST00000173985
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134443 ENST00000256857 N/A N/A N/A N/A N/A 0.962±0.00 N/A N/A N/A 1.841±0.00 N/A N/A 0.123±0.00 0.681±0.00
ENST00000420468 N/A N/A N/A 0.701±0.00 N/A 2.465±0.00 N/A 0.104±0.00 N/A 4.018±0.00 N/A N/A N/A 1.024±0.00
ENST00000456142 N/A N/A N/A 0.246±0.00 0.347±0.00 N/A N/A N/A N/A N/A N/A 0.111±0.00 N/A N/A
ENST00000529320 N/A N/A N/A 0.466±0.00 N/A 0.349±0.00 N/A N/A N/A 0.088±0.00 N/A N/A N/A 0.704±0.00
ENST00000530323 N/A 0.032±0.00 N/A N/A 0.352±0.00 1.698±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166562 ENST00000299714 11.814±0.00 29.184±0.00 N/A 62.390±0.00 10.942±0.00 14.747±0.00 5.835±0.00 36.324±0.00 26.608±24.83 16.733±0.00 2.308±0.00 1.953±0.00 7.192±0.22 23.687±0.00
ENST00000509791 N/A N/A 0.518±0.00 N/A 0.742±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585864 N/A N/A N/A N/A 1.450±0.00 N/A 0.317±0.00 N/A N/A 2.317±0.00 N/A N/A N/A N/A
ENST00000587834 N/A N/A 2.549±0.00 6.094±0.00 8.838±0.00 3.858±0.00 0.912±0.23 8.467±0.00 3.477±0.00 3.368±0.00 N/A 22.973±14.94 13.707±10.89 18.430±13.61
ENST00000588875 10.883±0.00 39.482±0.00 N/A 36.952±11.87 15.116±0.00 9.344±4.61 1.671±0.68 24.307±5.91 51.331±0.00 10.533±3.79 2.437±1.98 10.359±0.00 13.018±1.74 17.608±0.00
ENST00000591406 N/A N/A N/A 22.455±0.00 N/A N/A N/A N/A N/A N/A N/A 14.257±8.75 15.367±0.00 N/A
ENST00000592774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593132 N/A N/A 0.888±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024516 ENSMUST00000025394 9.580±4.19 11.843±4.56 26.551±4.27 23.919±17.80 15.508±5.28 56.039±10.81 6.599±0.57 13.234±1.47 21.422±8.56 19.349±3.22 13.156±1.36 13.585±5.98 42.153±13.99 6.941±0.81
ENSMUST00000125552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.829±0.88 N/A N/A
ENSMUST00000126432 4.263±0.00 4.179±0.59 N/A N/A 3.573±0.48 N/A N/A 4.247±0.00 2.061±0.00 N/A N/A 9.184±0.00 N/A N/A
ENSMUST00000126651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.339±0.00
ENSMUST00000139538 1.779±0.68 0.676±0.13 3.780±0.09 2.332±0.20 2.364±0.58 3.553±0.36 0.564±0.16 0.712±0.16 1.801±0.89 2.485±0.42 1.456±0.14 1.488±1.09 2.179±0.67 0.352±0.00
ENSMUST00000153193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000024517 ENSMUST00000025395 0.083±0.04 N/A 0.244±0.00 2.710±2.21 N/A 0.694±0.29 N/A N/A 0.027±0.00 1.479±0.69 0.066±0.02 0.072±0.00 0.128±0.08 0.088±0.00
ENSMUST00000173530 0.129±0.00 N/A N/A N/A N/A 2.871±0.70 N/A N/A N/A 0.662±0.33 0.172±0.00 N/A N/A 0.135±0.01
ENSMUST00000173985 N/A N/A N/A 1.235±0.00 N/A 0.374±0.00 N/A N/A N/A 0.369±0.00 N/A N/A 0.054±0.01 N/A

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