C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC11 homolog C (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126432 Sec11c-002 ENSMUSG00000024516 10090 + 18:65800550-65817656 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLiverOvaryENSMUST00000126432
Transcript ID Adipose Adrenal Breast Kidney Liver Ovary
ENSMUST00000126432 4.263±0.00 4.179±0.59 3.573±0.48 4.247±0.00 2.061±0.00 9.184±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086L CIL_00086L_0002 VISTA 18:65229356-65832579
CIL_0006O6 CIL_0006O6_0002 CGP 18:65800549-65886579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006465 IEA signal peptide processing
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008236 IEA serine-type peptidase activity
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299714 SEC11C-007 nonsense_mediated_decay Homo_sapiens 0 942
ENST00000509791 SEC11C-005 protein_coding Homo_sapiens 4.2039e-45 187
ENST00000587834 SEC11C-001 protein_coding Homo_sapiens 0 538
ENST00000588875 SEC11C-006 protein_coding Homo_sapiens 0 272
ENST00000591406 SEC11C-008 retained_intron Homo_sapiens 0 540

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