C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily V, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310522 TRPV1-006 ENSG00000196689 9606 - 17:3566815-3592350 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverTestisENST00000310522
Transcript ID Liver Testis
ENST00000310522 0.404±0.00 2.006±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane
GO:0034220 IEA ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006106 Trpv1-002 protein_coding Mus_musculus 0 2444
ENSMUST00000108470 Trpv1-003 protein_coding Mus_musculus 0 1834
ENSMUST00000102526 Trpv1-001 protein_coding Mus_musculus 0 1502
ENSMUST00000138853 Trpv1-004 protein_coding Mus_musculus 0 1399
ENSMUST00000128113 Trpv1-005 processed_transcript Mus_musculus 0 510
ENSMUST00000112217 Trpv4-007 protein_coding Mus_musculus 0 206
ENSMUST00000112219 Trpv4-006 protein_coding Mus_musculus 0 206
ENSMUST00000112222 Trpv4-005 protein_coding Mus_musculus 0 206
ENSMUST00000133019 Trpv4-004 retained_intron Mus_musculus 0 206
ENSMUST00000112225 Trpv4-002 protein_coding Mus_musculus 0 206
ENSMUST00000071968 Trpv4-001 protein_coding Mus_musculus 0 206

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