C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000312150 KRT25-001 ENSG00000204897 9606 - 17:40748021-40755332 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartTestisENST00000312150
Transcript ID Breast Heart Testis
ENST00000312150 0.140±0.00 0.028±0.00 0.392±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000F CGP 17:40697991-40755332
CIL_00056U CIL_00056U_000R CGP 17:40748021-40772162

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005882 IEA intermediate filament
GO:0007568 IDA aging
GO:0031069 IEA hair follicle morphogenesis
GO:0042633 IDA hair cycle
GO:0045109 IEA intermediate filament organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038004 Krt25-001 protein_coding Mus_musculus 0 1528
ENSMUST00000017732 Krt27-001 protein_coding Mus_musculus 0 881
ENSMUST00000006963 Krt28-001 protein_coding Mus_musculus 0 778
ENSMUST00000100482 Krt26-001 protein_coding Mus_musculus 0 431
ENSMUST00000148770 Krt26-002 processed_transcript Mus_musculus 6.00036e-42 176
ENSMUST00000007280 Krt16-001 protein_coding Mus_musculus 2e-37 161
ENSMUST00000107411 Krt15-001 protein_coding Mus_musculus 8e-31 139
ENSMUST00000007272 Krt14-001 protein_coding Mus_musculus 3e-25 121
ENSMUST00000080893 Krt17-001 protein_coding Mus_musculus 4e-24 117
ENSMUST00000007275 Krt13-001 protein_coding Mus_musculus 1e-18 99

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