C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100482 Krt26-001 ENSMUSG00000075570 10090 - 11:99328614-99337966 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMusclePlacentaTestisENSMUST00000100482
Transcript ID Bladder Brain Liver Muscle Placenta Testis
ENSMUST00000100482 0.006±0.00 0.026±0.01 0.005±0.00 0.060±0.05 0.078±0.05 0.051±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000Z CGP 11:99315516-99337966
CIL_00056U CIL_00056U_001B CGP 11:99328550-99351104

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000167586 KRT14-001 protein_coding Homo_sapiens 5e-28 130
ENST00000254043 KRT15-001 protein_coding Homo_sapiens 7e-31 141
ENST00000300992 KRT17P2-001 transcribed_unprocessed_pseudogene Homo_sapiens 8e-20 102
ENST00000301653 KRT16-001 protein_coding Homo_sapiens 2e-32 145
ENST00000311208 KRT17-001 protein_coding Homo_sapiens 3.9937e-43 180
ENST00000312150 KRT25-001 protein_coding Homo_sapiens 0 431
ENST00000326333 KRT17P2-002 processed_transcript Homo_sapiens 7e-20 102
ENST00000393974 KRT15-004 protein_coding Homo_sapiens 9e-24 117
ENST00000393976 KRT15-007 protein_coding Homo_sapiens 3e-31 141
ENST00000399211 KRT17P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 3e-24 117
ENST00000420566 KRT17P3-001 unprocessed_pseudogene Homo_sapiens 2e-25 121
ENST00000453795 KRT17P6-001 transcribed_unprocessed_pseudogene Homo_sapiens 2e-21 108
ENST00000491673 KRT17-004 retained_intron Homo_sapiens 2e-23 113
ENST00000493253 KRT17-003 retained_intron Homo_sapiens 5e-38 163
ENST00000577449 KRT17P1-005 retained_intron Homo_sapiens 2e-23 113
ENST00000577817 KRT17-005 protein_coding Homo_sapiens 2e-23 113
ENST00000580363 KRT17P1-003 processed_transcript Homo_sapiens 4e-20 102
ENST00000588319 KRT16-002 retained_intron Homo_sapiens 3e-23 113

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