C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0002LV_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000057635-ENSDARG00000003920 | CGP | 7955 | 21:11419543-11432572  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000003920  (setb)SET translocation (myeloid leukemia-associated) B |
ENSDART00000023834 (setb-001)
|
11428691-11432572 | protein_coding | |
|
ENSDARG00000019231 (spna2) spectrin alpha 2 |
ENSDART00000102251 (spna2-001)
|
11352584-11419552 | protein_coding | |
|
ENSDART00000102253 (spna2-002)
|
11407506-11419552 | protein_coding | ||
|
ENSDART00000102256 (spna2-201)
|
11352601-11419549 | protein_coding | ||
|
ENSDART00000132524 (spna2-003)
|
11374977-11375971 | retained_intron | ||
|
ENSDART00000140267 (spna2-004)
|
11383796-11389682 | protein_coding | ||
|
ENSDART00000140667 (spna2-005)
|
11414063-11419236 | retained_intron | ||
|
ENSDARG00000057635 (dync2i1) dynein, cytoplasmic 2, intermediate chain 1 |
ENSDART00000080347 (dync2i1-001)
|
11419543-11427049 | protein_coding | |
|
ENSDART00000123238 (dync2i1-002)
|
11419555-11427049 | nonsense_mediated_decay | ||
| CIL_0002LV_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000119333-ENSG00000119335 | CGP | 9606 | 9:128633661-128696400 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000119333 (WDR34) WD repeat domain 34 |
ENST00000372715 (WDR34-005)
|
128633661-128656787 | protein_coding | |
|
ENST00000419989 (WDR34-001)
|
128636084-128656681 | protein_coding | ||
|
ENST00000451652 (WDR34-002)
|
128635918-128656699 | protein_coding | ||
|
ENST00000473486 (WDR34-003)
|
128635323-128637028 | processed_transcript | ||
|
ENST00000480613 (WDR34-006)
|
128635179-128656681 | processed_transcript | ||
|
ENST00000483181 (WDR34-004)
|
128634695-128636063 | processed_transcript | ||
|
ENSG00000119335 (SET) SET nuclear proto-oncogene |
ENST00000322030 (SET-002)
|
128689226-128696388 | protein_coding | |
|
ENST00000372686 (SET-010)
|
128689989-128694894 | protein_coding | ||
|
ENST00000372688 (SET-201)
|
128689987-128694664 | protein_coding | ||
|
ENST00000372692 (SET-001)
|
128683655-128696400 | protein_coding | ||
|
ENST00000409104 (SET-003)
|
128685083-128694734 | protein_coding | ||
|
ENST00000454747 (SET-009)
|
128683424-128683991 | protein_coding | ||
|
ENST00000466009 (SET-005)
|
128690250-128691918 | processed_transcript | ||
|
ENST00000477806 (SET-008)
|
128690281-128693998 | processed_transcript | ||
|
ENST00000480217 (SET-004)
|
128690285-128692916 | processed_transcript | ||
|
ENST00000480536 (SET-012)
|
128691078-128692756 | retained_intron | ||
|
ENST00000485056 (SET-011)
|
128692351-128692935 | retained_intron | ||
|
ENSG00000197694 (SPTAN1) spectrin, alpha, non-erythrocytic 1 |
ENST00000358161 (SPTAN1-201)
|
128552558-128633665 | protein_coding | |
|
ENST00000372731 (SPTAN1-004)
|
128552590-128633662 | protein_coding | ||
|
ENST00000372739 (SPTAN1-005)
|
128552590-128633662 | protein_coding | ||
|
ENST00000461855 (SPTAN1-008)
|
128599964-128607989 | processed_transcript | ||
|
ENST00000472211 (SPTAN1-001)
|
128580956-128581946 | processed_transcript | ||
|
ENST00000475367 (SPTAN1-006)
|
128592984-128599704 | processed_transcript | ||
|
ENST00000476825 (SPTAN1-002)
|
128611901-128615806 | processed_transcript | ||
|
ENST00000491712 (SPTAN1-003)
|
128621178-128625855 | processed_transcript | ||
|
ENST00000497216 (SPTAN1-007)
|
128552605-128553336 | processed_transcript | ||
|
ENSG00000234705 (HMGA1P4) high mobility group AT-hook 1 pseudogene 4 |
ENST00000428643 (HMGA1P4-001)
|
128663134-128663578 | antisense | |
| CIL_0002LV_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000039715-ENSMUSG00000054766 | CGP | 10090 | 2:30031546-30072577 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000039715 (Wdr34) WD repeat domain 34 |
ENSMUST00000113711 (Wdr34-001)
|
30031546-30048881 | protein_coding | |
|
ENSMUST00000139145 (Wdr34-004)
|
30031912-30032505 | retained_intron | ||
|
ENSMUST00000143892 (Wdr34-003)
|
30033794-30035046 | retained_intron | ||
|
ENSMUST00000146275 (Wdr34-002)
|
30047171-30048861 | processed_transcript | ||
|
ENSMUSG00000054766 (Set) SET nuclear oncogene |
ENSMUST00000067996 (Set-002)
|
30066456-30072577 | protein_coding | |
|
ENSMUST00000102866 (Set-001)
|
30061853-30072577 | protein_coding | ||
|
ENSMUST00000125824 (Set-005)
|
30062601-30071118 | processed_transcript | ||
|
ENSMUST00000134364 (Set-004)
|
30057378-30070303 | protein_coding | ||
|
ENSMUST00000137291 (Set-006)
|
30067193-30069630 | processed_transcript | ||
|
ENSMUST00000147590 (Set-007)
|
30070170-30071429 | processed_transcript | ||
|
ENSMUST00000149578 (Set-003)
|
30061754-30069557 | protein_coding | ||
Expression Patterns
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