C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family A (ABC1), member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340001 ABCA9-001 ENSG00000154258 9606 - 17:68974488-69061064 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000340001
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000340001 3.287±0.00 0.282±0.00 0.411±0.00 0.216±0.05 1.917±0.27 2.394±1.05 1.675±0.51 1.382±1.02 0.493±0.01 0.584±0.45 1.999±0.20 0.060±0.00 0.860±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037T CIL_00037T_0001 CGP 17:68974488-69141888

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IEA mitochondrion
GO:0006200 IEA ATP catabolic process
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044850 Abca9-001 protein_coding Mus_musculus 0 4058
ENSMUST00000106664 Abca8a-202 protein_coding Mus_musculus 0 1059
ENSMUST00000046223 Abca8a-201 protein_coding Mus_musculus 0 1059
ENSMUST00000100287 Abca8a-001 protein_coding Mus_musculus 0 1059
ENSMUST00000106669 Abca8b-002 protein_coding Mus_musculus 0 1013
ENSMUST00000020948 Abca8b-001 protein_coding Mus_musculus 0 1013
ENSMUST00000044003 Abca6-001 protein_coding Mus_musculus 0 326

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