Transcript ID | Colon | Lung | Ovary | Placenta | Testis |
---|---|---|---|---|---|
ENST00000347545 | 1.096±0.00 | 2.053±0.00 | 10.575±2.26 | 10.801±0.00 | 3.008±0.00 |
Transcript Info |
||||||
Description: | Rho guanine nucleotide exchange factor (GEF) 1 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000347545 | ARHGEF1-001 | ENSG00000076928 | 9606 | + | 19:41883225-41907454 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0003UK | CIL_0003UK_0002 | CGP | 19:41877120-41930150 |
CIL_0003VE | CIL_0003VE_0001 | CGP | 19:41883161-41959390 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0005089 | IEA | Rho guanyl-nucleotide exchange factor activity |
GO:0005096 | IEA | GTPase activator activity |
GO:0005515 | IPI | protein binding |
GO:0005737 | IDA:IEA | cytoplasm |
GO:0005829 | TAS | cytosol |
GO:0005886 | IDA | plasma membrane |
GO:0007266 | TAS | Rho protein signal transduction |
GO:0008283 | TAS | cell proliferation |
GO:0032321 | IEA | positive regulation of Rho GTPase activity |
GO:0035023 | IEA | regulation of Rho protein signal transduction |
GO:0038032 | IEA | termination of G-protein coupled receptor signaling pathway |
GO:0044822 | IDA | poly(A) RNA binding |
GO:0048011 | TAS | neurotrophin TRK receptor signaling pathway |
GO:0050770 | TAS | regulation of axonogenesis |
GO:0050771 | TAS | negative regulation of axonogenesis |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000117419 | Arhgef1-006 | protein_coding | Mus_musculus | 0 | 2780 |
ENSMUST00000047873 | Arhgef1-003 | protein_coding | Mus_musculus | 0 | 2780 |
ENSMUST00000145783 | Arhgef1-005 | processed_transcript | Mus_musculus | 0 | 2080 |
ENSMUST00000098683 | Arhgef1-001 | protein_coding | Mus_musculus | 0 | 2080 |
ENSMUST00000117796 | Arhgef1-002 | protein_coding | Mus_musculus | 0 | 2080 |
ENSMUST00000132751 | Arhgef1-008 | protein_coding | Mus_musculus | 0 | 1700 |
ENSMUST00000132786 | Arhgef1-015 | processed_transcript | Mus_musculus | 0 | 789 |
ENSMUST00000144714 | Arhgef1-011 | retained_intron | Mus_musculus | 0 | 599 |
ENSMUST00000126918 | Arhgef1-014 | retained_intron | Mus_musculus | 0 | 348 |
ENSMUST00000127761 | Arhgef1-004 | retained_intron | Mus_musculus | 0 | 340 |
ENSMUST00000126484 | Arhgef1-013 | retained_intron | Mus_musculus | 0 | 315 |
ENSMUST00000151121 | Arhgef1-010 | protein_coding | Mus_musculus | 0 | 267 |