C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 72
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354310 KRT72-002 ENSG00000170486 9606 - 12:52585714-52601538 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000354310
Transcript ID Ovary Testis
ENST00000354310 0.048±0.00 4.794±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000D CGP 12:52565782-52601538
CIL_00033Q CIL_00033Q_000E CGP 12:52585589-52618559

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament
GO:0008150 ND biological_process
GO:0045095 IEA keratin filament
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071104 Krt72-001 protein_coding Mus_musculus 0 797
ENSMUST00000063292 Krt73-001 protein_coding Mus_musculus 0 719
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 379
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 364
ENSMUST00000023710 Krt71-001 protein_coding Mus_musculus 0 291
ENSMUST00000087996 Krt77-001 protein_coding Mus_musculus 0 268
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 0 204
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 9e-31 139
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 9e-31 139

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