C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 72
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071104 Krt72-001 ENSMUSG00000056605 10090 - 15:101776172-101786458 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleTestisENSMUST00000071104
Transcript ID Brain Muscle Testis
ENSMUST00000071104 0.014±0.00 0.924±0.00 0.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_0014 CGP 15:101754259-101786458
CIL_00033Q CIL_00033Q_000X CGP 15:101776172-101802343

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0045095 IEA keratin filament
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257951 KRT84-001 protein_coding Homo_sapiens 5.04467e-44 183
ENST00000267119 KRT71-001 protein_coding Homo_sapiens 0 950
ENST00000293745 KRT72-201 protein_coding Homo_sapiens 0 1351
ENST00000305620 KRT74-001 protein_coding Homo_sapiens 0 911
ENST00000305748 KRT73-001 protein_coding Homo_sapiens 0 955
ENST00000341809 KRT77-001 protein_coding Homo_sapiens 0 361
ENST00000354310 KRT72-002 protein_coding Homo_sapiens 0 797
ENST00000396270 KRT8P39-001 processed_pseudogene Homo_sapiens 4e-33 147
ENST00000417996 KRT3-001 protein_coding Homo_sapiens 0 529
ENST00000453110 KRT8P17-001 processed_pseudogene Homo_sapiens 0 193
ENST00000463294 KRT8P13-001 processed_pseudogene Homo_sapiens 0 231
ENST00000473150 KRT8P25-001 processed_pseudogene Homo_sapiens 3.9937e-43 180
ENST00000537672 KRT72-001 protein_coding Homo_sapiens 0 1345
ENST00000546934 KRT73-002 retained_intron Homo_sapiens 0 259
ENST00000548097 KRT4-002 nonsense_mediated_decay Homo_sapiens 0 431
ENST00000549343 KRT74-003 protein_coding Homo_sapiens 0 654
ENST00000549979 KRT72-004 protein_coding Homo_sapiens 1e-35 154
ENST00000550829 KRT72-003 nonsense_mediated_decay Homo_sapiens 0 1107
ENST00000551956 KRT4-001 protein_coding Homo_sapiens 0 518
ENST00000552855 KRT73-003 protein_coding Homo_sapiens 0 460
ENST00000553168 KRT77-002 nonsense_mediated_decay Homo_sapiens 0.000000000002 79

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