C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023709 Krt5-001 ENSMUSG00000061527 10090 - 15:101707070-101712891 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023709
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023709 0.565±0.52 0.026±0.00 240.510±15.22 10.289±7.39 26.269±8.14 0.135±0.10 0.609±0.13 1.511±0.63 0.628±0.95 26.843±26.36 2.325±1.21 0.084±0.02 1.194±1.08 0.337±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000Y CGP 15:101689932-101712891
CIL_00033Q CIL_00033Q_0010 CGP 15:101707070-101743109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005886 IDA plasma membrane
GO:0016020 IEA membrane
GO:0045095 IDA keratin filament
GO:0070062 IEA extracellular vesicular exosome
GO:0097110 IEA scaffold protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252242 KRT5-001 protein_coding Homo_sapiens 0 2010
ENST00000252245 KRT75-001 protein_coding Homo_sapiens 0 972
ENST00000252250 KRT6C-001 protein_coding Homo_sapiens 0 1275
ENST00000252252 KRT6B-001 protein_coding Homo_sapiens 0 1267
ENST00000257901 KRT85-001 protein_coding Homo_sapiens 0 363
ENST00000257951 KRT84-001 protein_coding Homo_sapiens 0 346
ENST00000267119 KRT71-001 protein_coding Homo_sapiens 0 549
ENST00000293308 KRT8-002 protein_coding Homo_sapiens 0 593
ENST00000293525 KRT86-201 protein_coding Homo_sapiens 0 322
ENST00000293745 KRT72-201 protein_coding Homo_sapiens 0 577
ENST00000304620 KRT78-001 protein_coding Homo_sapiens 0 390
ENST00000305748 KRT73-001 protein_coding Homo_sapiens 0 586
ENST00000327741 KRT81-001 protein_coding Homo_sapiens 0 322
ENST00000330553 KRT79-001 protein_coding Homo_sapiens 0 621
ENST00000330722 KRT6A-001 protein_coding Homo_sapiens 0 1301
ENST00000331817 KRT7-001 protein_coding Homo_sapiens 0 665
ENST00000332411 KRT76-001 protein_coding Homo_sapiens 0 625
ENST00000354310 KRT72-002 protein_coding Homo_sapiens 0 379
ENST00000359499 KRT78-002 protein_coding Homo_sapiens 0 303
ENST00000392131 KRT8P40-001 processed_pseudogene Homo_sapiens 0 191
ENST00000396270 KRT8P39-001 processed_pseudogene Homo_sapiens 0 363
ENST00000409686 KRT8P11-001 processed_pseudogene Homo_sapiens 0 472
ENST00000413425 KRT8P18-001 processed_pseudogene Homo_sapiens 0 363
ENST00000414254 KRT8P14-001 processed_pseudogene Homo_sapiens 0 327
ENST00000414328 KRT8P45-001 processed_pseudogene Homo_sapiens 0 479
ENST00000417996 KRT3-001 protein_coding Homo_sapiens 0 641
ENST00000423953 KRT8P20-001 processed_pseudogene Homo_sapiens 0 298
ENST00000423955 KRT86-001 protein_coding Homo_sapiens 0 322
ENST00000425226 KRT8P15-001 processed_pseudogene Homo_sapiens 0 350
ENST00000430398 KRT8P21-001 processed_pseudogene Homo_sapiens 4e-23 113
ENST00000432100 KRT8P30-001 processed_pseudogene Homo_sapiens 4e-30 135
ENST00000441370 KRT8P38-001 processed_pseudogene Homo_sapiens 0.00000000000003 84
ENST00000441609 KRT8P44-001 processed_pseudogene Homo_sapiens 0 246
ENST00000451609 KRT8P37-001 processed_pseudogene Homo_sapiens 0 385
ENST00000463294 KRT8P13-001 processed_pseudogene Homo_sapiens 0 479
ENST00000468527 KRT8P12-002 processed_transcript Homo_sapiens 1e-21 108
ENST00000472924 KRT8P12-001 transcribed_processed_pseudogene Homo_sapiens 0 207
ENST00000473150 KRT8P25-001 processed_pseudogene Homo_sapiens 0 372
ENST00000483942 KRT8P35-001 processed_pseudogene Homo_sapiens 0 374
ENST00000489121 KRT8P36-001 processed_pseudogene Homo_sapiens 0 418
ENST00000508125 KRT8P33-001 processed_pseudogene Homo_sapiens 0 505
ENST00000509735 KRT8P4-001 processed_pseudogene Homo_sapiens 8.40779e-45 185
ENST00000512037 KRT8P46-001 processed_pseudogene Homo_sapiens 0 435
ENST00000512863 KRT8P32-001 processed_pseudogene Homo_sapiens 0 438
ENST00000515599 KRT8P48-001 processed_pseudogene Homo_sapiens 0 407
ENST00000519669 KRT8P3-001 processed_pseudogene Homo_sapiens 0 523
ENST00000529785 KRT87P-001 processed_transcript Homo_sapiens 0 298
ENST00000533003 KRT8P7-001 processed_pseudogene Homo_sapiens 0 433
ENST00000533985 KRT8P41-001 processed_pseudogene Homo_sapiens 0 390
ENST00000534154 KRT8P26-001 processed_pseudogene Homo_sapiens 0 206
ENST00000534226 KRT87P-002 transcribed_unprocessed_pseudogene Homo_sapiens 0 298
ENST00000537672 KRT72-001 protein_coding Homo_sapiens 0 577
ENST00000544265 KRT85-002 protein_coding Homo_sapiens 0 291
ENST00000546453 KRT79-002 retained_intron Homo_sapiens 0 394
ENST00000546542 KRT8-015 protein_coding Homo_sapiens 0.000000002 68
ENST00000546583 KRT8-005 retained_intron Homo_sapiens 0 403
ENST00000546826 KRT8-013 protein_coding Homo_sapiens 0 359
ENST00000546897 KRT8-003 protein_coding Homo_sapiens 0 593
ENST00000546934 KRT73-002 retained_intron Homo_sapiens 0 414
ENST00000547031 KRT8-020 retained_intron Homo_sapiens 0 444
ENST00000547110 KRT78-003 protein_coding Homo_sapiens 0 191
ENST00000547183 KRT127P-001 unprocessed_pseudogene Homo_sapiens 3e-20 102
ENST00000547413 KRT8-016 protein_coding Homo_sapiens 2e-39 167
ENST00000547613 KRT7-005 processed_transcript Homo_sapiens 8e-37 158
ENST00000547890 KRT5-010 retained_intron Homo_sapiens 0 481
ENST00000548097 KRT4-002 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000548409 KRT5-008 protein_coding Homo_sapiens 0 822
ENST00000548735 KRT6A-005 retained_intron Homo_sapiens 9.99967e-42 172
ENST00000548998 KRT8-014 protein_coding Homo_sapiens 0 263
ENST00000549264 KRT90P-001 unprocessed_pseudogene Homo_sapiens 0 359
ENST00000549420 KRT5-005 protein_coding Homo_sapiens 0 623
ENST00000549511 KRT5-009 retained_intron Homo_sapiens 0 776
ENST00000549600 KRT6A-004 retained_intron Homo_sapiens 0 296
ENST00000549754 KRT6A-003 retained_intron Homo_sapiens 0 427
ENST00000549898 KRT6A-002 retained_intron Homo_sapiens 0 460
ENST00000550170 KRT8-008 retained_intron Homo_sapiens 0 403
ENST00000551013 KRT5-006 retained_intron Homo_sapiens 0 494
ENST00000551188 KRT5-007 protein_coding Homo_sapiens 0 547
ENST00000551916 KRT8P19-001 processed_pseudogene Homo_sapiens 0 361
ENST00000551956 KRT4-001 protein_coding Homo_sapiens 0 540
ENST00000552150 KRT8-004 protein_coding Homo_sapiens 0 593
ENST00000552551 KRT8-001 protein_coding Homo_sapiens 0 593
ENST00000552629 KRT5-002 retained_intron Homo_sapiens 0 1760
ENST00000552668 KRT4-003 nonsense_mediated_decay Homo_sapiens 4e-19 99
ENST00000552952 KRT5-011 retained_intron Homo_sapiens 0.0000000000002 81
ENST00000553087 KRT6C-002 retained_intron Homo_sapiens 0 329
ENST00000556193 KRT8P2-001 processed_pseudogene Homo_sapiens 2.99878e-43 180
ENST00000557533 KRT8P1-001 processed_pseudogene Homo_sapiens 0 385
ENST00000558927 KRT8P9-001 processed_pseudogene Homo_sapiens 0 388
ENST00000560090 KRT8P23-001 processed_pseudogene Homo_sapiens 0 433
ENST00000562022 KRT8P50-001 processed_pseudogene Homo_sapiens 0 374
ENST00000592443 KRT8P5-001 processed_pseudogene Homo_sapiens 0 375
ENST00000604166 KRT8P49-001 processed_pseudogene Homo_sapiens 0 401
ENST00000604727 KRT8P47-001 processed_pseudogene Homo_sapiens 0 396
ENST00000615839 KRT81-201 protein_coding Homo_sapiens 0 322
ENST00000620027 KRT123P-001 transcribed_unprocessed_pseudogene Homo_sapiens 1.00053e-42 178
ENST00000622375 TTBK2-201 protein_coding Homo_sapiens 0 219

Loading