C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SRC proto-oncogene, non-receptor tyrosine kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358208 SRC-201 ENSG00000197122 9606 + 20:37382604-37405432 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358208
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358208 3.911±0.00 5.286±0.00 0.899±0.00 3.690±2.99 3.537±1.22 11.283±0.00 1.376±0.00 13.404±0.00 2.624±1.19 5.869±5.16 0.531±0.17 13.553±11.49 7.615±2.88 11.776±3.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YE CIL_0006YE_0001 CGP 20:37289638-37406050
CIL_0006Y4 CIL_0006Y4_0001 CGP 20:37344685-37527931

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IDA:IEA protein kinase activity
GO:0004713 IDA:IEA protein tyrosine kinase activity
GO:0004715 TAS non-membrane spanning protein tyrosine kinase activity
GO:0005070 TAS SH3/SH2 adaptor activity
GO:0005102 IPI receptor binding
GO:0005178 TAS integrin binding
GO:0005515 IPI:IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005764 IDA lysosome
GO:0005770 IDA late endosome
GO:0005829 IDA cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 IDA plasma membrane
GO:0005901 IDA caveola
GO:0006468 IEA protein phosphorylation
GO:0007049 IEA cell cycle
GO:0007155 IEA cell adhesion
GO:0007165 TAS signal transduction
GO:0007172 TAS signal complex assembly
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007179 IMP transforming growth factor beta receptor signaling pathway
GO:0007229 IMP integrin-mediated signaling pathway
GO:0007265 TAS Ras protein signal transduction
GO:0007411 TAS axon guidance
GO:0007596 TAS blood coagulation
GO:0008543 TAS fibroblast growth factor receptor signaling pathway
GO:0010632 IMP regulation of epithelial cell migration
GO:0016032 IEA viral process
GO:0016301 TAS kinase activity
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0018108 IDA peptidyl-tyrosine phosphorylation
GO:0019899 IPI enzyme binding
GO:0020037 IDA heme binding
GO:0022407 IMP regulation of cell-cell adhesion
GO:0030168 TAS platelet activation
GO:0031295 TAS T cell costimulation
GO:0032463 IMP negative regulation of protein homooligomerization
GO:0033625 TAS positive regulation of integrin activation
GO:0035556 IDA intracellular signal transduction
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0042169 IPI SH2 domain binding
GO:0043066 IMP negative regulation of apoptotic process
GO:0043114 TAS regulation of vascular permeability
GO:0043149 IMP stress fiber assembly
GO:0043154 IMP negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0044325 IPI ion channel binding
GO:0045087 TAS innate immune response
GO:0045124 TAS regulation of bone resorption
GO:0045453 ISS bone resorption
GO:0046777 IDA protein autophosphorylation
GO:0046875 IPI ephrin receptor binding
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0050847 ISS progesterone receptor signaling pathway
GO:0050900 TAS leukocyte migration
GO:0051219 IPI phosphoprotein binding
GO:0051895 ISS negative regulation of focal adhesion assembly
GO:0051897 IMP positive regulation of protein kinase B signaling
GO:0051902 IMP negative regulation of mitochondrial depolarization
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome
GO:0070555 IMP response to interleukin-1
GO:0070851 IPI growth factor receptor binding
GO:0071393 ISS cellular response to progesterone stimulus
GO:2000641 IMP regulation of early endosome to late endosome transport
GO:2000811 IMP negative regulation of anoikis
GO:2001237 IMP negative regulation of extrinsic apoptotic signaling pathway
GO:2001243 IMP negative regulation of intrinsic apoptotic signaling pathway
GO:2001286 IMP regulation of caveolin-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029175 Src-001 protein_coding Mus_musculus 0 2156
ENSMUST00000109533 Src-007 protein_coding Mus_musculus 0 2156
ENSMUST00000109531 Src-005 protein_coding Mus_musculus 0 2130
ENSMUST00000092576 Src-201 protein_coding Mus_musculus 0 2073
ENSMUST00000109529 Src-006 protein_coding Mus_musculus 0 2004
ENSMUST00000099967 Fyn-002 protein_coding Mus_musculus 0 523
ENSMUST00000146287 Fyn-005 protein_coding Mus_musculus 0 514
ENSMUST00000135242 Fyn-004 protein_coding Mus_musculus 0 514
ENSMUST00000126486 Fyn-003 protein_coding Mus_musculus 0 514
ENSMUST00000063091 Fyn-001 protein_coding Mus_musculus 0 514
ENSDART00000036635 fynb-001 protein_coding Danio_rerio 0 510
ENSMUST00000136659 Fyn-008 protein_coding Mus_musculus 0 492
ENSMUST00000129770 Src-002 processed_transcript Mus_musculus 0 462

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