C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ryanodine receptor 2 (cardiac)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360064 RYR2-201 ENSG00000198626 9606 + 1:237270497-237832644 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderLungMuscleTestisENST00000360064
Transcript ID Adrenal Bladder Lung Muscle Testis
ENST00000360064 0.145±0.00 0.161±0.00 0.979±0.00 0.078±0.06 0.244±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IY CIL_0008IY_0001 VISTA 1:236697312-237300217
CIL_0008J9 CIL_0008J9_0001 VISTA 1:236711218-237313545
CIL_0008J8 CIL_0008J8_0001 VISTA 1:236729167-237332656

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005219 IEA ryanodine-sensitive calcium-release channel activity
GO:0005262 IEA calcium channel activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0006811 IEA ion transport
GO:0006874 IEA cellular calcium ion homeostasis
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021750 Ryr2-201 protein_coding Mus_musculus 0 14800
ENSMUST00000170156 Ryr2-202 protein_coding Mus_musculus 0 14750
ENSDART00000149737 ryr2b-001 protein_coding Danio_rerio 0 863

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