C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: notchless homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360831 NLE1-005 ENSG00000073536 9606 - 17:35132071-35142303 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000360831
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000360831 1.671±0.00 1.564±0.00 1.238±0.99 0.154±0.03 0.272±0.00 1.343±0.00 1.364±0.00 1.971±0.00 3.466±0.48 2.356±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ES CIL_0006ES_0001 CGP 17:35092208-35130732
CIL_0003B9 CIL_0003B9_0001 CGP 17:35121579-35142315
CIL_0003K1 CIL_0003K1_0001 CGP 17:35128753-35189345

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103213 Nle1-001 protein_coding Mus_musculus 0 1168
ENSMUST00000167196 Nle1-006 nonsense_mediated_decay Mus_musculus 0 527
ENSMUST00000140318 Nle1-004 retained_intron Mus_musculus 0 468
ENSMUST00000126202 Nle1-002 nonsense_mediated_decay Mus_musculus 0 342
ENSMUST00000147915 Nle1-003 retained_intron Mus_musculus 0 191
ENSMUST00000124109 Nle1-005 retained_intron Mus_musculus 2e-32 145

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