C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: keratin 8 pseudogene 40
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392131 KRT8P40-001 ENSG00000213069 9606 + 2:177197985-177198547 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryENST00000392131
Transcript ID Liver Ovary
ENST00000392131 0.046±0.00 0.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0001 UCNEbase 2:175103181-177219808
CIL_00017S CIL_00017S_0001 CGP 2:176269395-177223958

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 484
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 191
ENSMUST00000042957 Krt75-001 protein_coding Mus_musculus 6e-33 145
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 1e-24 117
ENSMUST00000148248 Vim-004 retained_intron Mus_musculus 0.0000000000002 81
ENSMUST00000028062 Vim-001 protein_coding Mus_musculus 0.0000000000002 81

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