C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 75
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042957 Krt75-001 ENSMUSG00000022986 10090 - 15:101563345-101573904 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLungMuscleOvaryPlacentaTestisENSMUST00000042957
Transcript ID Adipose Bladder Brain Breast Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000042957 0.009±0.00 0.002±0.00 0.024±0.00 0.309±0.18 0.018±0.00 0.076±0.04 0.080±0.08 0.144±0.04 0.006±0.00 0.038±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000U CGP 15:101552356-101573904
CIL_00033Q CIL_00033Q_000P CGP 15:101563345-101628188

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IMP hematopoietic progenitor cell differentiation
GO:0005198 IEA structural molecule activity
GO:0005622 IDA intracellular
GO:0045095 IEA keratin filament
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 1e-16 94
ENSDART00000139071 desma-003 processed_transcript Danio_rerio 0.000000000000002 90
ENSDART00000081553 desma-001 protein_coding Danio_rerio 0.000000000000002 90
ENSDART00000081550 desma-002 protein_coding Danio_rerio 0.000000000000002 90
ENST00000224237 VIM-001 protein_coding Homo_sapiens 0.00000000009 73
ENST00000252242 KRT5-001 protein_coding Homo_sapiens 0 974
ENST00000252245 KRT75-001 protein_coding Homo_sapiens 0 1578
ENST00000267119 KRT71-001 protein_coding Homo_sapiens 0 414
ENST00000293308 KRT8-002 protein_coding Homo_sapiens 0 416
ENST00000304620 KRT78-001 protein_coding Homo_sapiens 0 263
ENST00000305620 KRT74-001 protein_coding Homo_sapiens 0 388
ENST00000305748 KRT73-001 protein_coding Homo_sapiens 0 429
ENST00000309680 KRT2-001 protein_coding Homo_sapiens 0 353
ENST00000330553 KRT79-001 protein_coding Homo_sapiens 0 460
ENST00000330722 KRT6A-001 protein_coding Homo_sapiens 0 891
ENST00000332411 KRT76-001 protein_coding Homo_sapiens 0 492
ENST00000359499 KRT78-002 protein_coding Homo_sapiens 0 206
ENST00000392131 KRT8P40-001 processed_pseudogene Homo_sapiens 6e-33 145
ENST00000414254 KRT8P14-001 processed_pseudogene Homo_sapiens 1e-28 132
ENST00000432100 KRT8P30-001 processed_pseudogene Homo_sapiens 0.00000000003 73
ENST00000451609 KRT8P37-001 processed_pseudogene Homo_sapiens 0 217
ENST00000463294 KRT8P13-001 processed_pseudogene Homo_sapiens 0 311
ENST00000469543 VIM-003 nonsense_mediated_decay Homo_sapiens 0.0000000001 73
ENST00000483942 KRT8P35-001 processed_pseudogene Homo_sapiens 3e-29 134
ENST00000487938 VIM-002 nonsense_mediated_decay Homo_sapiens 0.0000000001 73
ENST00000509735 KRT8P4-001 processed_pseudogene Homo_sapiens 2e-36 158
ENST00000515599 KRT8P48-001 processed_pseudogene Homo_sapiens 2e-40 171
ENST00000519669 KRT8P3-001 processed_pseudogene Homo_sapiens 0 363
ENST00000533003 KRT8P7-001 processed_pseudogene Homo_sapiens 0 276
ENST00000533985 KRT8P41-001 processed_pseudogene Homo_sapiens 0 215
ENST00000544301 VIM-201 protein_coding Homo_sapiens 0.0000000001 73
ENST00000546453 KRT79-002 retained_intron Homo_sapiens 0 326
ENST00000546583 KRT8-005 retained_intron Homo_sapiens 0 305
ENST00000546897 KRT8-003 protein_coding Homo_sapiens 0 416
ENST00000546934 KRT73-002 retained_intron Homo_sapiens 0 287
ENST00000547031 KRT8-020 retained_intron Homo_sapiens 0 300
ENST00000547106 KRT2-002 retained_intron Homo_sapiens 1e-34 150
ENST00000547110 KRT78-003 protein_coding Homo_sapiens 4e-30 135
ENST00000547890 KRT5-010 retained_intron Homo_sapiens 0 346
ENST00000548409 KRT5-008 protein_coding Homo_sapiens 0 542
ENST00000549264 KRT90P-001 unprocessed_pseudogene Homo_sapiens 0 204
ENST00000549343 KRT74-003 protein_coding Homo_sapiens 0 237
ENST00000549420 KRT5-005 protein_coding Homo_sapiens 0 409
ENST00000549511 KRT5-009 retained_intron Homo_sapiens 0 547
ENST00000550170 KRT8-008 retained_intron Homo_sapiens 0 305
ENST00000551013 KRT5-006 retained_intron Homo_sapiens 0 339
ENST00000551188 KRT5-007 protein_coding Homo_sapiens 0 363
ENST00000551275 KRT5-004 protein_coding Homo_sapiens 0 200
ENST00000552150 KRT8-004 protein_coding Homo_sapiens 0 416
ENST00000552551 KRT8-001 protein_coding Homo_sapiens 0 416
ENST00000552629 KRT5-002 retained_intron Homo_sapiens 0 944
ENST00000556193 KRT8P2-001 processed_pseudogene Homo_sapiens 6e-30 135
ENST00000592443 KRT8P5-001 processed_pseudogene Homo_sapiens 2.94273e-44 183
ENST00000604166 KRT8P49-001 processed_pseudogene Homo_sapiens 0 281

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