C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ring finger protein 34, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392464 RNF34-005 ENSG00000170633 9606 + 12:121400144-121430623 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007G3 CIL_0007G3_0002 CGP 12:121308245-121430623
CIL_0007G4 CIL_0007G4_0002 CGP 12:121400041-121581015

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031434 Rnf34-201 protein_coding Mus_musculus 0 1243
ENSMUST00000086200 Kdm2b-201 protein_coding Mus_musculus 0 418
ENSMUST00000118027 Kdm2b-003 protein_coding Mus_musculus 0 418
ENSMUST00000046073 Kdm2b-001 protein_coding Mus_musculus 0 418
ENSMUST00000031435 Kdm2b-009 protein_coding Mus_musculus 0 418
ENSMUST00000127403 Kdm2b-007 nonsense_mediated_decay Mus_musculus 0 414
ENSMUST00000121739 Kdm2b-002 protein_coding Mus_musculus 0 279
ENSMUST00000117674 Gm12397-001 processed_pseudogene Mus_musculus 0 276

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