C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase type 13A4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400270 ATP13A4-010 ENSG00000127249 9606 - 3:193402077-193418983 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLiverLungPlacentaTestisENST00000400270
Transcript ID Colon Heart Liver Lung Placenta Testis
ENST00000400270 0.048±0.00 0.017±0.00 0.118±0.00 4.772±0.00 0.054±0.00 0.235±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000N5 CIL_0000N5_0001 CGP 3:193274790-193593111
CIL_0000N8 CIL_0000N8_0001 CGP 3:193402077-193697823

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182013 Atp13a4-002 nonsense_mediated_decay Mus_musculus 0 599
ENSMUST00000057018 Atp13a4-006 protein_coding Mus_musculus 0 599
ENSMUST00000182627 Atp13a4-001 protein_coding Mus_musculus 0 599
ENSMUST00000182573 Atp13a4-007 nonsense_mediated_decay Mus_musculus 0 599

Loading