| Transcript ID | Brain | Kidney | Testis |
|---|---|---|---|
| ENSMUST00000057018 | 0.345±0.24 | 0.268±0.02 | 0.366±0.21 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ATPase type 13A4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000057018  |
Atp13a4-006 |
ENSMUSG00000038094 |
10090 | - |
16:29396041-29541483  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000N5 | CIL_0000N5_0002 | CGP | 16:29231851-29544864 |
| CIL_0000N8 | CIL_0000N8_0002 | CGP | 16:29395853-29654884 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005388 | IC | calcium-transporting ATPase activity |
| GO:0005524 | IEA | ATP binding |
| GO:0005789 | IDA | endoplasmic reticulum membrane |
| GO:0006200 | IEA | ATP catabolic process |
| GO:0006874 | IDA | cellular calcium ion homeostasis |
| GO:0016021 | IEA | integral component of membrane |
| GO:0046872 | IEA | metal ion binding |
| GO:0070588 | IC | calcium ion transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000295548
|
ATP13A4-009 | protein_coding | Homo_sapiens | 0 | 1304 |
|
ENST00000342695
|
ATP13A4-003 | protein_coding | Homo_sapiens | 0 | 2418 |
|
ENST00000392443
|
ATP13A4-007 | protein_coding | Homo_sapiens | 0 | 3808 |
|
ENST00000400270
|
ATP13A4-010 | protein_coding | Homo_sapiens | 0 | 599 |
|
ENST00000428352
|
ATP13A4-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 1657 |
|
ENST00000437904
|
ATP13A4-011 | nonsense_mediated_decay | Homo_sapiens | 0 | 394 |
|
ENST00000450950
|
ATP13A4-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 2418 |
|
ENST00000474776
|
ATP13A4-005 | retained_intron | Homo_sapiens | 0 | 231 |
|
ENST00000482964
|
ATP13A4-006 | processed_transcript | Homo_sapiens | 0 | 303 |
|
ENST00000490925
|
ATP13A4-002 | retained_intron | Homo_sapiens | 0 | 1373 |
