C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase type 13A4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182573 Atp13a4-007 ENSMUSG00000038094 10090 - 16:29395853-29456580 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonKidneyLungOvaryPlacentaTestisENSMUST00000182573
Transcript ID Adipose Colon Kidney Lung Ovary Placenta Testis
ENSMUST00000182573 0.051±0.00 0.041±0.00 0.094±0.00 0.499±0.16 0.088±0.00 0.010±0.00 1.002±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000N5 CIL_0000N5_0002 CGP 16:29231851-29544864
CIL_0000N8 CIL_0000N8_0002 CGP 16:29395853-29654884

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342695 ATP13A4-003 protein_coding Homo_sapiens 0 1881
ENST00000392443 ATP13A4-007 protein_coding Homo_sapiens 0 1655
ENST00000400270 ATP13A4-010 protein_coding Homo_sapiens 0 599
ENST00000428352 ATP13A4-001 nonsense_mediated_decay Homo_sapiens 0 2591
ENST00000437904 ATP13A4-011 nonsense_mediated_decay Homo_sapiens 0 394
ENST00000450950 ATP13A4-004 nonsense_mediated_decay Homo_sapiens 0 1881
ENST00000474776 ATP13A4-005 retained_intron Homo_sapiens 1e-16 90
ENST00000482964 ATP13A4-006 processed_transcript Homo_sapiens 0 303
ENST00000490925 ATP13A4-002 retained_intron Homo_sapiens 0 1598

Loading