C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000401937 RP4-803A2.1-001 ENSG00000217644 9606 + 1:32979947-32980472 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLungMuscleOvaryTestisENST00000401937
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000401937 0.037±0.00 0.357±0.00 0.257±0.00 0.044±0.00 0.077±0.00 0.251±0.00 0.041±0.00 0.189±0.00 0.611±0.00 0.073±0.02 0.073±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097K CIL_00097K_0001 VISTA 1:32956893-33558359

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054220 Rpl18a-201 protein_coding Mus_musculus 0 436
ENSMUST00000117288 Gm15427-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000161190 Rpl18a-ps1-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000121555 Rpl18-ps1-001 processed_pseudogene Mus_musculus 0 414
ENSDART00000030215 rpl18a-001 protein_coding Danio_rerio 0 228
ENSDART00000148933 rpl18a-002 nonsense_mediated_decay Danio_rerio 1.4013e-45 187
ENSMUST00000178437 Gm9002-001 processed_pseudogene Mus_musculus 6.99949e-42 174

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