C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: latent transforming growth factor beta binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402934 LTBP1-008 ENSG00000049323 9606 + 2:33134625-33399357 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000402934
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000402934 5.795±0.00 2.694±0.00 2.476±0.00 2.194±0.00 7.285±0.00 4.018±0.00 6.057±0.00 12.839±0.00 1.707±0.00 4.654±0.00 12.071±11.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TE CIL_0003TE_0002 CGP 2:32628032-33399509
CIL_0000MZ CIL_0000MZ_0001 CGP 2:32946972-33564750

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112514 Ltbp1-007 protein_coding Mus_musculus 0 5046
ENSMUST00000112516 Ltbp1-002 protein_coding Mus_musculus 0 3426
ENSMUST00000001927 Ltbp1-001 protein_coding Mus_musculus 0 3426
ENSMUST00000135447 Ltbp1-003 protein_coding Mus_musculus 0 1663
ENSMUST00000135750 Ltbp1-005 retained_intron Mus_musculus 0 893
ENSMUST00000127458 Ltbp1-004 retained_intron Mus_musculus 0 381
ENSDART00000079460 ltbp1-201 protein_coding Danio_rerio 9e-25 121
ENSDART00000155145 ltbp1-001 protein_coding Danio_rerio 4e-18 99

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