C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: latent transforming growth factor beta binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112516 Ltbp1-002 ENSMUSG00000001870 10090 + 17:75178810-75391336 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyLiverLungPlacentaTestisENSMUST00000112516
Transcript ID Bladder Brain Kidney Liver Lung Placenta Testis
ENSMUST00000112516 1.265±0.00 0.657±0.00 1.083±0.15 0.107±0.03 2.524±0.27 1.883±0.00 0.394±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TE CIL_0003TE_0003 CGP 17:74717750-75392512
CIL_0000MZ CIL_0000MZ_0002 CGP 17:75005568-75529043

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005578 IDA proteinaceous extracellular matrix
GO:0007179 TAS transforming growth factor beta receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000079460 ltbp1-201 protein_coding Danio_rerio 2e-26 126
ENSDART00000155145 ltbp1-001 protein_coding Danio_rerio 2e-26 126
ENST00000402934 LTBP1-008 protein_coding Homo_sapiens 0 3426
ENST00000404525 LTBP1-001 protein_coding Homo_sapiens 0 3432
ENST00000404816 LTBP1-014 protein_coding Homo_sapiens 0 5216
ENST00000407925 LTBP1-007 protein_coding Homo_sapiens 0 5317
ENST00000413303 LTBP1-006 protein_coding Homo_sapiens 0 562
ENST00000415140 LTBP1-017 protein_coding Homo_sapiens 0 763
ENST00000418533 LTBP1-201 protein_coding Homo_sapiens 0 3365
ENST00000432635 LTBP1-016 protein_coding Homo_sapiens 0 664
ENST00000468091 LTBP1-018 protein_coding Homo_sapiens 0 898

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