C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: latent transforming growth factor beta binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001927 Ltbp1-001 ENSMUSG00000001870 10090 + 17:75005568-75391767 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001927
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001927 3.303±2.02 1.460±0.31 5.266±1.36 0.594±0.02 2.307±1.15 1.807±0.54 2.072±1.26 1.160±0.26 0.374±0.23 1.747±0.10 1.181±0.16 17.437±10.92 1.403±0.69 0.339±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TE CIL_0003TE_0003 CGP 17:74717750-75392512
CIL_0000MZ CIL_0000MZ_0002 CGP 17:75005568-75529043

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005578 IDA proteinaceous extracellular matrix
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0031012 IEA extracellular matrix
GO:0050431 IEA transforming growth factor beta binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000079460 ltbp1-201 protein_coding Danio_rerio 3e-26 126
ENSDART00000155145 ltbp1-001 protein_coding Danio_rerio 3e-26 126
ENST00000402934 LTBP1-008 protein_coding Homo_sapiens 0 3426
ENST00000404525 LTBP1-001 protein_coding Homo_sapiens 0 3432
ENST00000404816 LTBP1-014 protein_coding Homo_sapiens 0 6061
ENST00000407925 LTBP1-007 protein_coding Homo_sapiens 0 5217
ENST00000413303 LTBP1-006 protein_coding Homo_sapiens 0 562
ENST00000415140 LTBP1-017 protein_coding Homo_sapiens 0 763
ENST00000418533 LTBP1-201 protein_coding Homo_sapiens 0 3265
ENST00000432635 LTBP1-016 protein_coding Homo_sapiens 0 664
ENST00000468091 LTBP1-018 protein_coding Homo_sapiens 0 898

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