C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5342
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181982 Gm5342-001 ENSMUSG00000098017 10090 + 7:69209884-69210886 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000181982
Transcript ID Brain
ENSMUST00000181982 0.007±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007O7 CIL_0007O7_0003 UCNEbase 7:69097096-72048391

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 819
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 226
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 804
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 819
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 819
ENST00000403053 RP1-182O16.2-001 processed_pseudogene Homo_sapiens 0 207
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 558
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 551
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 265
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 418
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 569
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 540
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 734
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 647
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 521
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 377
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 359
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 246
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 518
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 226
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 226
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 226
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 647
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 647
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 658
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 422
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 237
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 630
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 702
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 560
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 505
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 339

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