C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5300
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182201 Gm5300-001 ENSMUSG00000098052 10090 - 6:13055595-13056597 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000182201
Transcript ID Adipose Bladder Brain Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000182201 0.066±0.00 0.008±0.00 0.007±0.00 0.035±0.00 0.029±0.00 0.229±0.07 0.046±0.01 0.027±0.00 0.240±0.25 0.080±0.10 0.042±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022R CIL_00022R_0002 CGP 6:12311610-13089269

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 928
ENST00000328713 GAPDHP24-001 processed_pseudogene Homo_sapiens 0 488
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 719
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 928
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 928
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 928
ENST00000403053 RP1-182O16.2-001 processed_pseudogene Homo_sapiens 3.00018e-42 176
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 684
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 776
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 673
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 259
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 525
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 651
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 808
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 747
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 538
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 597
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 444
ENST00000447061 GAPDHP25-001 processed_pseudogene Homo_sapiens 0 684
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 405
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 719
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 719
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 671
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 713
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 734
ENST00000508195 RP11-616K22.1-001 processed_pseudogene Homo_sapiens 0 503
ENST00000509132 GAPDHP66-001 processed_pseudogene Homo_sapiens 0 496
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 566
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 741
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 250
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 765
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 712
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 621
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 621
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 846

Loading