Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	ribosomal protein L7 pseudogene 25
ENST00000404151	RPL7P25-001	ENSG00000216636	9606	+	6:34616538-34617258	processed_pseudogene

Expression Patterns

Transcript ID	Adrenal	Bladder	Brain	Breast	Heart	Liver	Lung	Muscle	Ovary	Testis
ENST00000404151	0.077±0.00	0.601±0.00	0.054±0.00	0.530±0.51	0.068±0.00	0.130±0.00	0.072±0.02	0.027±0.00	0.025±0.00	0.014±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0004LT	CIL_0004LT_0002	CGP	6:34537802-34696859
CIL_000258	CIL_000258_0001	CGP	6:34587288-34773794

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000119853	Gm12174-001	processed_pseudogene	Mus_musculus	0	595
ENSMUST00000058437	Rpl7-001	protein_coding	Mus_musculus	0	595
ENSMUST00000118173	Gm6274-001	processed_pseudogene	Mus_musculus	0	590
ENSMUST00000027054	Gm5045-201	processed_pseudogene	Mus_musculus	0	584
ENSMUST00000149566	Rpl7-003	protein_coding	Mus_musculus	0	544
ENSMUST00000118692	Gm12090-001	processed_pseudogene	Mus_musculus	0	466
ENSMUST00000122189	Gm5392-001	processed_pseudogene	Mus_musculus	0	459
ENSMUST00000148424	1700073E17Rik-001	transcribed_processed_pseudogene	Mus_musculus	0	442
ENSMUST00000152419	1700073E17Rik-002	processed_transcript	Mus_musculus	0	442
ENSMUST00000141217	Rpl7-002	retained_intron	Mus_musculus	0	435
ENSMUST00000117062	Gm15159-001	processed_pseudogene	Mus_musculus	0	399
ENSMUST00000136180	1700073E17Rik-004	processed_transcript	Mus_musculus	0	357
ENSMUST00000125005	Rpl7-004	retained_intron	Mus_musculus	0	302
ENSMUST00000151017	Rpl7-005	retained_intron	Mus_musculus	0	226
ENSMUST00000140597	Rpl7-006	processed_transcript	Mus_musculus	0	226

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